Mat 351

Mat 351 Mathematical Methods for Genetic Analysis

Syllabus: html pdf

Dates of tests:

Test 1, October, 13.

Test 2, November, 21.

Project due:

November 12

Announcements:

Review for Final Exam: pdf or html
Problems on Mapping and Sequencing
Review for Test 2: pdf or html
Problems on Mapping (Part 2)
Problems on Mapping (Part 1)
Problems on Viterbi's Algorithm
Problems on Markov Chains
Quiz 5, Friday 11/07
Quiz 4- take-home, due 10/20: pdf or html . Tests are here
Review for Test 1: pdf or html
Test 1 is moved to Monday, 10/13.
Problems on Alignment
Problems on Algorithms
Quiz 3, Moday 09/29
Quiz 2, Friday 09/19 (Graph Theory Problems, Probability)
More Probability problems
Basic Probability problems
Quiz 1, Friday 09/05.
String Counting problems

Links:

Pseudo-code keywords
Illustrations of some algorithms ( java required):
the linear search , the binary search , Hanoi towers recursive algorithm
Boyer-Moore algorithm example
BLAST
The central dogma of molecular biology